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wiki:software:mb668 [2024/03/20 15:20] – keistcwiki:software:mb668 [2024/03/20 15:20] (current) – keistc
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 This class required numerous packages to download and compile. This class required numerous packages to download and compile.
 a list of software that we will need to run for the computing labs: a list of software that we will need to run for the computing labs:
-  * R and Rscript Already installed in the docker image.\+  * R and Rscript Already installed in the docker image.
   * [[https://github.com/BenLangmead/bowtie2|Bowtie2]] Click on tags and then download the latest version. Unzip the file and then cp the bowtie2* files into the hub bin folder.   * [[https://github.com/BenLangmead/bowtie2|Bowtie2]] Click on tags and then download the latest version. Unzip the file and then cp the bowtie2* files into the hub bin folder.
   * [[https://github.com/samtools/samtools/releases/|SAMtools]] Download the source file.  Then ./configure --prefix=/home/.hub_local, make, make install   * [[https://github.com/samtools/samtools/releases/|SAMtools]] Download the source file.  Then ./configure --prefix=/home/.hub_local, make, make install
wiki/software/mb668.txt · Last modified: 2024/03/20 15:20 by keistc
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